The job is carried out through the following research centres of the Council.
- Drug Standardization Research Institute (DSRI), Ghaziabad.
- Central research Institute of UNANI Medicine (CRIUM), Hyderabad
- Regional Research Institute of UNANI Medicine (RRIUM), Chennai
- Regional Research Institute of UNANI Medicine (RRIUM), Srinagar
- Regional Research Institute of UNANI Medicine (RRIUM), Aligarh
- Drug Standardization Research Unit (DSRU), New Delhi
- Chemical Research Unit (Grant-in-Aid), AMU, Aligarh.